Imprinting Loci

Sfmbt2

Name

Scm-like with four mbt domains 2

Chromosome

2

Expressed parental allele: maternal (M)/ paternal (P)

P

Chromosomal Region

prox 2

Imprinting Gene Pubmed Publications

Displaying 1 - 10 of 13 Loci Publications
Pubmed ID Title Authors Journal
9 811 942 Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, Threat TA, Wang X, Horton JH, Cui Y, Wang X, Pryor E, Paris J, Wells-Smith J, Kitchen JR, Rowe LB, Eppig J, Satoh T, Brant L, Fujiwara H, Yotsumoto S, Nakashima H Human molecular genetics. 1998 Nov;7(12):1967-78
12 466 851 Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schönbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group Phase I & II Team Nature. 2002 Dec 5;420(6915):563-73
12 466 296 Gene expression profiling of embryo-derived stem cells reveals candidate genes associated with pluripotency and lineage specificity. Tanaka TS, Kunath T, Kimber WL, Jaradat SA, Stagg CA, Usuda M, Yokota T, Niwa H, Rossant J, Ko MS Genome research. 2002 Dec;12(12):1921-8
12 904 583 A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, Floss T, Van Sloun P, Füchtbauer EM, Vauti F, Arnold HH, Schnütgen F, Wurst W, von Melchner H, Ruiz P Proceedings of the National Academy of Sciences of the United States of America. 2003 Aug 19;100(17):9918-22
14 610 273 Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J, BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N, Zhu Q, Person C, Sands AT Proceedings of the National Academy of Sciences of the United States of America. 2003 Nov 25;100(24):14109-14
12 520 002 BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE Nucleic acids research. 2003 Jan 1;31(1):278-81
16 141 072 The transcriptional landscape of the mammalian genome. Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science (New York, N.Y.). 2005 Sep 2;309(5740):1559-63
17 302 988 Novel gene expression patterns along the proximo-distal axis of the mouse embryo before gastrulation. Frankenberg S, Smith L, Greenfield A, Zernicka-Goetz M BMC developmental biology. 2007 Feb 15;7:8
18 024 232 The PcG gene Sfmbt2 is paternally expressed in extraembryonic tissues. Kuzmin A, Han Z, Golding MC, Mann MR, Latham KE, Varmuza S Gene expression patterns : GEP. 2008 Jan;8(2):107-16
18 799 693 Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ, Finnell RH, Sands AT, Zambrowicz BP, Abuin A Genome research. 2008 Oct;18(10):1670-9

Pages

Imprinting Regions

Region Uniparental Duplication Proximal Breakpoint Distal Breakpoint Effects Loci
prox 2 MatDp(prox2) cent T11H Feotal/placental growth retardation, postnatal viable Gatm, Sfmbt2
prox 2 PatDp(prox2) cent T11H Normal feotal growth, placental overgrowth, postnatal viable Gatm, Sfmbt2

Imprinting Regions Pubmed Publications

Pubmed ID Publication Title Authors Journal
3 625 109 Parental origin effects in mice. Cattanach BM Journal of embryology and experimental morphology. 1986 Oct;97 Suppl:137-50
2 090 432 Autosomal and X-chromosome imprinting. Cattanach BM, Beechey CV Development (Cambridge, England). Supplement. 1990;:63-72
15 454 552 Interactions between imprinting effects in the mouse. Cattanach BM, Beechey CV, Peters J Genetics. 2004 Sep;168(1):397-413
16 575 158 Interactions between imprinting effects: summary and review. Cattanach BM, Beechey CV, Peters J Cytogenetic and genome research. 2006;113(1-4):17-23
446 096 Colinearity in the mouse genome: a study of chromosome 2. Searle AG, Beechey CV, Eicher EM, Nesbitt MN, Washburn LL Cytogenetics and cell genetics. 1979;23(4):255-63
3 625 109 Parental origin effects in mice. Cattanach BM Journal of embryology and experimental morphology. 1986 Oct;97 Suppl:137-50
2 090 432 Autosomal and X-chromosome imprinting. Cattanach BM, Beechey CV Development (Cambridge, England). Supplement. 1990;:63-72
15 454 552 Interactions between imprinting effects in the mouse. Cattanach BM, Beechey CV, Peters J Genetics. 2004 Sep;168(1):397-413
16 575 158 Interactions between imprinting effects: summary and review. Cattanach BM, Beechey CV, Peters J Cytogenetic and genome research. 2006;113(1-4):17-23
446 096 Colinearity in the mouse genome: a study of chromosome 2. Searle AG, Beechey CV, Eicher EM, Nesbitt MN, Washburn LL Cytogenetics and cell genetics. 1979;23(4):255-63