Imprinting Loci

Gatm

Name

glycine amidinotransferase (L-arginine:glycine amidinotransferase)

Chromosome

2

Expressed parental allele: maternal (M)/ paternal (P)

M

Chromosomal Region

prox 2

Orphanet Disorders

OrphaNet ID Name Url
35 704 Arginine:glycine amidinotransferase deficiency http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=EN&Expert=35704

Orphanet Categories

Inborn errors of metabolism
Rare neurologic disease

Imprinting Gene Pubmed Publications

Displaying 1 - 10 of 14 Loci Publications
Pubmed ID Title Authors Journal
11 217 851 Functional annotation of a full-length mouse cDNA collection. Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schönbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S, Hayashizaki Y, RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Nature. 2001 Feb 8;409(6821):685-90
12 466 851 Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schönbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group Phase I & II Team Nature. 2002 Dec 5;420(6915):563-73
12 671 064 Gatm, a creatine synthesis enzyme, is imprinted in mouse placenta. Sandell LL, Guan XJ, Ingram R, Tilghman SM Proceedings of the National Academy of Sciences of the United States of America. 2003 Apr 15;100(8):4622-7
14 651 853 Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, Bunkenborg J, Olsen JV, Hjerrild M, Wisniewski JR, Stahl E, Bolouri MS, Ray HN, Sihag S, Kamal M, Patterson N, Lander ES, Mann M Cell. 2003 Nov 26;115(5):629-40
15 475 267 Gene discovery by microarray: identification of novel genes induced during growth factor-mediated muscle cell survival and differentiation. Kuninger D, Kuzmickas R, Peng B, Pintar JE, Rotwein P Genomics. 2004 Nov;84(5):876-89
16 141 072 The transcriptional landscape of the mammalian genome. Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) Science (New York, N.Y.). 2005 Sep 2;309(5740):1559-63
16 247 769 Expression and functional analysis of genes deregulated in mouse placental overgrowth models: Car2 and Ncam1. Singh U, Sun T, Shi W, Schulz R, Nuber UA, Varanou A, Hemberger MC, Elliott RW, Ohta H, Wakayama T, Fundele R Developmental dynamics : an official publication of the American Association of Anatomists. 2005 Dec;234(4):1034-45
14 681 479 GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Visel A, Thaller C, Eichele G Nucleic acids research. 2004 Jan 1;32(Database issue):D552-6
18 614 015 A mitochondrial protein compendium elucidates complex I disease biology. Pagliarini DJ, Calvo SE, Chang B, Sheth SA, Vafai SB, Ong SE, Walford GA, Sugiana C, Boneh A, Chen WK, Hill DE, Vidal M, Evans JG, Thorburn DR, Carr SA, Mootha VK Cell. 2008 Jul 11;134(1):112-23
21 267 068 A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nürnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Dollé P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A PLoS biology. 2011 Jan 18;9(1):e1000582

Pages

Imprinting Regions

Region Uniparental Duplication Proximal Breakpoint Distal Breakpoint Effects Loci
prox 2 MatDp(prox2) cent T11H Feotal/placental growth retardation, postnatal viable Gatm, Sfmbt2
prox 2 PatDp(prox2) cent T11H Normal feotal growth, placental overgrowth, postnatal viable Gatm, Sfmbt2

Imprinting Regions Pubmed Publications

Pubmed ID Publication Title Authors Journal
3 625 109 Parental origin effects in mice. Cattanach BM Journal of embryology and experimental morphology. 1986 Oct;97 Suppl:137-50
2 090 432 Autosomal and X-chromosome imprinting. Cattanach BM, Beechey CV Development (Cambridge, England). Supplement. 1990;:63-72
15 454 552 Interactions between imprinting effects in the mouse. Cattanach BM, Beechey CV, Peters J Genetics. 2004 Sep;168(1):397-413
16 575 158 Interactions between imprinting effects: summary and review. Cattanach BM, Beechey CV, Peters J Cytogenetic and genome research. 2006;113(1-4):17-23
446 096 Colinearity in the mouse genome: a study of chromosome 2. Searle AG, Beechey CV, Eicher EM, Nesbitt MN, Washburn LL Cytogenetics and cell genetics. 1979;23(4):255-63
3 625 109 Parental origin effects in mice. Cattanach BM Journal of embryology and experimental morphology. 1986 Oct;97 Suppl:137-50
2 090 432 Autosomal and X-chromosome imprinting. Cattanach BM, Beechey CV Development (Cambridge, England). Supplement. 1990;:63-72
15 454 552 Interactions between imprinting effects in the mouse. Cattanach BM, Beechey CV, Peters J Genetics. 2004 Sep;168(1):397-413
16 575 158 Interactions between imprinting effects: summary and review. Cattanach BM, Beechey CV, Peters J Cytogenetic and genome research. 2006;113(1-4):17-23
446 096 Colinearity in the mouse genome: a study of chromosome 2. Searle AG, Beechey CV, Eicher EM, Nesbitt MN, Washburn LL Cytogenetics and cell genetics. 1979;23(4):255-63